Sine bell and squared Sine bell window multiplication

In this example, we use sine bell or squared sine bell window multiplication to apodize a NMR signal in the time domain.

import spectrochempy as scp

DATADIR = scp.preferences.datadir
path = DATADIR / "nmrdata" / "bruker" / "tests" / "nmr" / "topspin_1d"

dataset1D = scp.read_topspin(path, expno=1, remove_digital_filter=True)
dataset1D

NDDataset: [complex128] pp (size: 12411)[topspin_1d expno:1 procno:1 (FID)]

Summary

name

:

topspin_1d expno:1 procno:1 (FID)

author

:

runner@fv-az805-61

created

:

2025-03-20 15:35:01+00:00

Data

title

:

intensity

values

:

...

R[ 1078 2284 ... 0.2342 -0.1008] pp
I[ -1037 -2200 ... 0.06203 -0.05273] pp

size

:

12411 (complex)

Dimension `x`

size

:

12411

title

:

F1 acquisition time

coordinates

:

[ 0 4 ... 4.964e+04 4.964e+04] µs

Normalize the dataset values and reduce the time domain

dataset1D /= dataset1D.real.data.max()  # normalize
dataset1D = dataset1D[0.0:15000.0]

Apply Sine bell window apodization with parameter ssb=2, which correspond to a cosine function

new1, curve1 = scp.sinm(dataset1D, ssb=2, retapod=True, inplace=False)

this is equivalent to

new1, curve1 = dataset1D.sinm(ssb=2, retapod=True, inplace=False)

or also

new1, curve1 = scp.sp(dataset1D, ssb=2, pow=1, retapod=True, inplace=False)

Apply Sine bell window apodization with parameter ssb=2, which correspond to a sine function

new2, curve2 = dataset1D.sinm(ssb=1, retapod=True, inplace=False)

Apply Squared Sine bell window apodization with parameter ssb=1 and ssb=2

new3, curve3 = scp.qsin(dataset1D, ssb=2, retapod=True, inplace=False)
new4, curve4 = dataset1D.qsin(ssb=1, retapod=True, inplace=False)

Apply shifted Sine bell window apodization with parameter ssb=8 (mixed sine/cosine window)

new5, curve5 = dataset1D.sinm(ssb=8, retapod=True, inplace=False)

Plotting

dataset1D.plot(zlim=(-2, 2), color="k")
curve1.plot(color="r", clear=False)
new1.plot(
    data_only=True, color="r", clear=False, label=" sinm with ssb= 2 (cosine window)"
)
curve2.plot(color="b", clear=False)
new2.plot(
    data_only=True, color="b", clear=False, label=" sinm with ssb= 1 (sine window)"
)
curve3.plot(color="m", clear=False)
new3.plot(data_only=True, color="m", clear=False, label=" qsin with ssb= 2")
curve4.plot(color="g", clear=False)
new4.plot(data_only=True, color="g", clear=False, label=" qsin with ssb= 1")
curve5.plot(color="c", ls="--", clear=False)
new5.plot(
    data_only=True,
    color="c",
    ls="--",
    clear=False,
    label=" sinm with ssb= 8",
    legend="best",
)

This ends the example ! The following line can be uncommented if no plot shows when running the .py script with python scp.show() sphinx_gallery_thumbnail_number = -1